MuSpAn
A Multiscale Spatial Analysis toolbox
Comprehensive guides for using MuSpAn effectively
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Empowering Spatial Biology
MuSpAn is a multiscale spatial analysis toolbox for analysing spatial data. It provides seamless access to both classical and cutting-edge spatial data analysis approaches, allowing you to pick and choose from the most comprehensive collection of mathematical approaches available.
MuSpAn is being continually expanded, with a team of quantitative researchers constantly developing new methodology to tackle problems in analysing spatial transcriptomics, multiplex immunohistochemistry, imaging mass cytometry and more.


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In-depth user tutorials on MuSpAn features, statistics, visualisation and more
Why MuSpAn?
MuSpAn brings together rigorous quantitative methods and a flexible, modular architecture, giving researchers the freedom to build spatial workflows that match the structure of their data. This makes MuSpAn ideal for both hypothesis generation and creating bespoke question-driven workflows.


Flexible Spatial Analysis
Rather than enforcing a single pipeline, MuSpAn offers a flexible framework that enables users to build bespoke workflows.
Validated and Robust Software
MuSpAn is covered by extensive unit testing, ensuring precision and accuracy of statistics and their implementations.
Mathematical and Statistical Rigour
MuSpAn is a curated toolbox, featuring methods selected by mathematicians and statisticians for their capacity to provide deep insight into spatial data.
Explore Spatial Analysis
Data Visualization
Explore colored points and polygons in your datasets.


Software Tools
Access tools designed for spatial transcriptomics and histology.


User Registration
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Partner Links
Visit the Oxford University Innovation site to download Muspan.
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Contact Us
Reach out to us for inquiries, support, or to learn more about our spatial analysis toolbox designed for biologists.
Support
support@muspan.co.uk
Inquiries
info@muspan.co.uk
MuSpAn
Quantitative tools for multiscale spatial data analysis.
Contact us
info@muspan.co.uk
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muspan for commercial use
If you're interested in a commercial license, or in opportunities for MuSpAn consultancy, please email us via info@muspan.co.uk and we can connect you with our colleagues at Oxford University Innovation.
